MTB Resistance by Whole Genome Sequencing

General Information

Lab Name

MTB Resistance by Whole Genome Sequencing

Lab Code

MTBWGR

Epic Name

MTB Resistance by Whole Genome Sequencing

Description

More information regarding submission of samples can be obtained viewing individual test pages below.

Molecular Microbiology Order Form
Molecular Microbiology Specimen Submission: Additional information regarding specimen submission.
Molecular Microbiology Acceptable Specimens: Full list of acceptable specimens.

Synonyms

Antimicrobial Resistance, MTB Resistance, MTB Susceptibility, Next generation sequencing, NGS, Tuberculosis, WGS, whole genome identification, Whole Genome sequencing

Components

Code Name
MTBAMI MTB Amikacin Resistance by Whole Genome Seq
MTBDLM MTB Delamanid Resistance by Whole Genome Seq
MTBPZA MTB Pyrazinamide Resistance by Whole Genome Seq
MTBINH MTB Isoniazid Resistance by Whole Genome Seq
MTBLEV MTB Levofloxacin Resistance by Whole Genome Seq
MTBETH MTB Ethionamide Resistance by Whole Genome Seq
MTBSTM MTB Streptomycin Resistance by Whole Genome Seq
MTBLZD MTB Linezolid Resistance by Whole Genome Seq
MTBMXF MTB Moxifloxacin Resistance by Whole Genome Seq
MTBRIF MTB Rifampicin Resistance by Whole Genome Seq
MTBEMB MTB Ethambutol Resistance by Whole Genome Seq
MTBBDQ MTB Bedaquiline Resistance by Whole Genome Seq
MTBCFZ MTB Clofazimine Resistance by Whole Genome Seq
MTBRPT MTB Rifapentine Resistance by Whole Genome Seq
MTBPTO MTB Prothionamide Resistance by Whole Genome Seq
MTBPMD MTB Pretomanid Resistance by Whole Genome Seq
MTBMET MTB Resistance by Whole Genome Seq: Method Note

Interpretation

Reference Range

See individual components

Ref. Range Notes

Susceptible

Resistant or Indeterminate results are considered abnormal.

Guidelines

Ordering & Collection

Specimen Type

Pure Culture

Collection

Handling Instructions

Send pure culture with growth (plate or slant) at room or refrigerated temperature. Follow approved regulations for transporting infectious substances.

A mixed culture will be rejected or subject to an additional charge.

Quantity

requested: plate or slant

Processing

Performance

LIS Dept Code

Micro Molecular Diag (MMD)

Performing Location(s)

CL Infectious Disease Division (IDD) - Molecular Microbiology
206-520-4600

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Shipping Address

Attn: Molecular Microbiology
UW CLSPS
1601 Lind Ave SW Room 117
Renton, WA 98057
Phone: 206-598-5735

Performing Lab Address

UW Medicine Central Laboratory
IDD-Molecular Microbiology
1601 Lind Ave SW Room 485
Renton WA 98057

Phone: (206) 485-9108

Contact Information

Please e-mail us with any questions or comments you may have. Your inquiry will be answered as soon as possible.

email: molmicdx@uw.edu

The Molecular Microbiology lab is open from Monday-Friday, 7am-4pm PDT.

Billing inquiries and requests for faxed reports can be made to our Client Services Department at (206) 520-4600 or (800) 713-5198.

For results or other inquiries, we can be reached by phone at the following numbers:

  • Phone: (206) 598-5735
  • FAX: (206) 520-4903

For assistance during weekends, holidays and after hours, please contact Lab Medicine Resident at (206) 598-6190

Frequency

Twice a week, Turnaround time 5-10 business days after receiving the specimen

Available STAT?

No

Billing & Coding

CPT codes

87153

LOINC

94053-6

Interfaced Order Code

UOW4641